https://www.pathogen-ai.com/models daily 0.75 2025-04-11 https://www.pathogen-ai.com/models/foundation-model monthly 0.5 2025-03-23 https://images.squarespace-cdn.com/content/v1/677410a41091921154662041/f211a620-c9e7-4e15-8ae4-a41c3a713a64/heatmap.png Models - Foundation Model - Make it stand out Whatever it is, the way you tell your story online can make all the difference. https://images.squarespace-cdn.com/content/v1/677410a41091921154662041/4d441865-e788-4a32-8d9d-25154a726629/output+%283%29.png Models - Foundation Model - Make it stand out Benchmark Comparison Between Pathogen AI Encoder Base and Nucleotide Transformers Multispecies (2.5B) https://images.squarespace-cdn.com/content/v1/677410a41091921154662041/82487d93-92ea-45fd-940e-dfad337c964d/output+%282%29.png Models - Foundation Model - Make it stand out Pathogen AI Encoder Base Across Open Source Genomic Benchmarks https://images.squarespace-cdn.com/content/v1/677410a41091921154662041/3bd02456-a24b-40f0-bd4a-e2c0997e7dac/Screenshot+2025-01-24+172655+%281%29.png Models - Foundation Model - Make it stand out t-SNE Plot of Splice Site Acceptors Training Set Embeddings https://images.squarespace-cdn.com/content/v1/677410a41091921154662041/1740186987955-QTG3CAIU43591FMQVDLG/Splice_Sites_Acceptors_benchmark.png Models - Foundation Model https://images.squarespace-cdn.com/content/v1/677410a41091921154662041/1740186987955-DHGVQIJ4LLFI0JGPMYXG/Splice_Sites_All_benchmark.png Models - Foundation Model https://images.squarespace-cdn.com/content/v1/677410a41091921154662041/1740186988773-PID4K6SL7O5RILBJBY11/Splice_Sites_Donors_benchmark.png Models - Foundation Model https://images.squarespace-cdn.com/content/v1/677410a41091921154662041/1740186996023-HTUEE64G3CZXKWD6WX1L/Promoters_%28non%E2%88%92TATA%29_benchmark.png Models - Foundation Model https://images.squarespace-cdn.com/content/v1/677410a41091921154662041/1740186996041-NPIPNTFT1I5GN2CJ148E/Promoters_%28TATA%29_benchmark.png Models - Foundation Model https://images.squarespace-cdn.com/content/v1/677410a41091921154662041/1740187003260-EUMXKRZBGY3WL7HCGBZ3/Enhancers_%28types%29_benchmark.png Models - Foundation Model https://images.squarespace-cdn.com/content/v1/677410a41091921154662041/1740186996845-Z2N2ACKO5LQXTRHJ7C7B/Promoters_benchmark.png Models - Foundation Model https://images.squarespace-cdn.com/content/v1/677410a41091921154662041/1740187003272-XND3XPJVLL75DZFEU8V3/Enhancers_benchmark.png Models - Foundation Model https://images.squarespace-cdn.com/content/v1/677410a41091921154662041/1740187004036-EXRYKLEHXNS0QON1HAPN/H2AFZ_benchmark.png Models - Foundation Model https://images.squarespace-cdn.com/content/v1/677410a41091921154662041/1740187004162-XQFU67CLGHIITID34SFJ/H3K4me1_benchmark.png Models - Foundation Model https://images.squarespace-cdn.com/content/v1/677410a41091921154662041/1740187004943-5NWUYKYTP1T87KHZGSEN/H3K4me2_benchmark.png Models - Foundation Model https://images.squarespace-cdn.com/content/v1/677410a41091921154662041/1740187005092-TAYTYIT811SX8Q5YXLBK/H3K4me3_benchmark.png Models - Foundation Model https://images.squarespace-cdn.com/content/v1/677410a41091921154662041/1740187005716-YST7KL5WN18CITU47I33/H3K9ac_benchmark.png Models - Foundation Model https://images.squarespace-cdn.com/content/v1/677410a41091921154662041/1740187005998-7RT9OFE6YPPI1086FOQF/H3K9me3_benchmark.png Models - Foundation Model https://images.squarespace-cdn.com/content/v1/677410a41091921154662041/1740187006614-XCB5X817TLFX0PRJSPZP/H3K27ac_benchmark.png Models - Foundation Model https://images.squarespace-cdn.com/content/v1/677410a41091921154662041/1740187006775-DXKW08FYDFJL1R5O9ENY/H3K27me3_benchmark.png Models - Foundation Model https://images.squarespace-cdn.com/content/v1/677410a41091921154662041/1740187007426-5HL97BQIFR5C60RJE6CG/H3K36me3_benchmark.png Models - Foundation Model https://images.squarespace-cdn.com/content/v1/677410a41091921154662041/1740187007581-KME0FGLYQPVQAZRX46HF/H4K20me1_benchmark.png Models - Foundation Model https://images.squarespace-cdn.com/content/v1/677410a41091921154662041/5ba29323-e171-4ce2-977a-6e185c05725f/AVG_benchmark.png Models - Foundation Model - Make it stand out Average Matthew’s Correlation Coefficient (MCC) Across 18 Genomic Bencharks https://www.pathogen-ai.com/models/ebola monthly 0.5 2025-03-24 https://images.squarespace-cdn.com/content/v1/677410a41091921154662041/12c256df-489f-46ab-a7ff-0a4b439d6f9b/5_aa.png Models - Ebola 1.0 - Make it stand out Resulting AI Predicted Amino Acid Sequence Aligned To ‘MT778479’ (sequenced 2019-12-29). https://images.squarespace-cdn.com/content/v1/677410a41091921154662041/d9f2dff2-9abc-44b2-ac90-f67056814856/ebola_input.png Models - Ebola 1.0 - Make it stand out AI Model Prediction Scoring Perfect Accuracy. Democratic Republic of Congo Zaire Ebolavirus Strain Mayibout Glycoproteine (GP) Gene, Complete CDS. Input sequence date: 2019-04-12. Ground truth sequence date: 2020-04-10. 4 amino Acids mutations correctly predicted https://images.squarespace-cdn.com/content/v1/677410a41091921154662041/1742584993323-VBQRJKIN20E30HM3AK1Z/n_11.png Models - Ebola 1.0 https://images.squarespace-cdn.com/content/v1/677410a41091921154662041/1742584990884-374ATZYNNV069U3TD0AW/n_5.png Models - Ebola 1.0 https://images.squarespace-cdn.com/content/v1/677410a41091921154662041/1742584989947-N9Z6GSZDQD9J5KLE64PL/n_2.png Models - Ebola 1.0 https://images.squarespace-cdn.com/content/v1/677410a41091921154662041/1742584991721-A43FWV5Z8Q9ABZ133RBT/n_7.png Models - Ebola 1.0 https://images.squarespace-cdn.com/content/v1/677410a41091921154662041/1742584991602-V07JWD790RQBO1BIZJN9/n_6.png Models - Ebola 1.0 https://images.squarespace-cdn.com/content/v1/677410a41091921154662041/1742584989226-MXVTFHBQUJ2Z43YR1XBY/n_0.png Models - Ebola 1.0 https://images.squarespace-cdn.com/content/v1/677410a41091921154662041/1742584990771-ROFWVHJ8CPISU2QOV6IC/n_4.png Models - Ebola 1.0 https://images.squarespace-cdn.com/content/v1/677410a41091921154662041/1742584993212-Z0FHX7O2G205BA9WHG5U/n_10.png Models - Ebola 1.0 https://images.squarespace-cdn.com/content/v1/677410a41091921154662041/1742584989224-6XQS3C2NDQS9KY0VATPC/n_1.png Models - Ebola 1.0 https://images.squarespace-cdn.com/content/v1/677410a41091921154662041/1742584990072-18C93ZNFEDIJRQNOSRGC/n_3.png Models - Ebola 1.0 https://images.squarespace-cdn.com/content/v1/677410a41091921154662041/1742584992420-2JWTUGQNLLYLBPYNMMMG/n_8.png Models - Ebola 1.0 https://images.squarespace-cdn.com/content/v1/677410a41091921154662041/1742584992538-GCS8V96QQDTTJEY8CFZU/n_9.png Models - Ebola 1.0 https://images.squarespace-cdn.com/content/v1/677410a41091921154662041/1742584993944-7GP59TLDYY4K52OAN9ZA/n_12.png Models - Ebola 1.0 https://images.squarespace-cdn.com/content/v1/677410a41091921154662041/1742586049226-UJY3X70P139I0SIFLUFR/nt_0.png Models - Ebola 1.0 https://images.squarespace-cdn.com/content/v1/677410a41091921154662041/1742586049224-3L0QS67REY1EGATWJHBC/nt_1.png Models - Ebola 1.0 https://images.squarespace-cdn.com/content/v1/677410a41091921154662041/1742586050051-9ZCSE95EDICCQTCUJO4K/nt_2.png Models - Ebola 1.0 https://images.squarespace-cdn.com/content/v1/677410a41091921154662041/1742586050156-O7QGOPPI01SQKXG2T9AB/nt_3.png Models - Ebola 1.0 https://images.squarespace-cdn.com/content/v1/677410a41091921154662041/1742586050906-BN7EY9ATGUMOKH34RXE2/nt_4.png Models - Ebola 1.0 https://images.squarespace-cdn.com/content/v1/677410a41091921154662041/1742586051054-28I6Q1R4INL2LUPJMM2O/nt_5.png Models - Ebola 1.0 https://images.squarespace-cdn.com/content/v1/677410a41091921154662041/1742586051761-VKVRQ7LH1R66M6KXQH9B/nt_6.png Models - Ebola 1.0 https://images.squarespace-cdn.com/content/v1/677410a41091921154662041/1742586051923-94VJCK4HBGD8GOTTUVJS/nt_7.png Models - Ebola 1.0 https://images.squarespace-cdn.com/content/v1/677410a41091921154662041/1742586052601-0BDFZN1AGEHWVGFAHBFT/nt_8.png Models - Ebola 1.0 https://images.squarespace-cdn.com/content/v1/677410a41091921154662041/1742586052841-9NFQ3OHOQS2D1T61B11B/nt_9.png Models - Ebola 1.0 https://images.squarespace-cdn.com/content/v1/677410a41091921154662041/1742586053504-U4R4XO10QTQEMCIGFGOL/nt_10.png Models - Ebola 1.0 https://images.squarespace-cdn.com/content/v1/677410a41091921154662041/1742586053616-23QBLY5H49BV552WY98N/nt_11.png Models - Ebola 1.0 https://images.squarespace-cdn.com/content/v1/677410a41091921154662041/1742586054453-K0K57UY8WN5M5ZJMFWLX/nt_12.png Models - Ebola 1.0 https://images.squarespace-cdn.com/content/v1/677410a41091921154662041/1742584390127-FKEPP1SWKW41U6BMKBYY/aa_12.png Models - Ebola 1.0 https://images.squarespace-cdn.com/content/v1/677410a41091921154662041/1742584386221-45SWFPZIAOSQ5MXTXMWD/aa_3.png Models - Ebola 1.0 https://images.squarespace-cdn.com/content/v1/677410a41091921154662041/1742584386143-IQCHAFXYLC6LP64JH15N/aa_2.png Models - Ebola 1.0 https://images.squarespace-cdn.com/content/v1/677410a41091921154662041/1742584385345-67KHU49GYRBWDLEUU504/aa_1.png Models - Ebola 1.0 https://images.squarespace-cdn.com/content/v1/677410a41091921154662041/1742584386959-7QS8VQBRR1PUHYB1EG67/aa_4.png Models - Ebola 1.0 https://images.squarespace-cdn.com/content/v1/677410a41091921154662041/1742584387868-H5I92GZEQZMMRG6VUCU4/aa_7.png Models - Ebola 1.0 https://images.squarespace-cdn.com/content/v1/677410a41091921154662041/1742584387075-X08RV4WITEZUOZIZZS4F/aa_5.png Models - Ebola 1.0 https://images.squarespace-cdn.com/content/v1/677410a41091921154662041/1742584389089-8ZJITATWW3Z0X055IK8K/aa_10.png Models - Ebola 1.0 https://images.squarespace-cdn.com/content/v1/677410a41091921154662041/1742584387772-9G1NA0EGC2UOUEWIMTU6/aa_6.png Models - Ebola 1.0 https://images.squarespace-cdn.com/content/v1/677410a41091921154662041/1742584385344-IWUUZLKJK98LQZZE8QAH/aa_0.png Models - Ebola 1.0 https://images.squarespace-cdn.com/content/v1/677410a41091921154662041/1742584388443-5QHS353DND66FY8H5UUA/aa_8.png Models - Ebola 1.0 https://images.squarespace-cdn.com/content/v1/677410a41091921154662041/1742584388549-J81H04P404Y3SG3YEECO/aa_9.png Models - Ebola 1.0 https://images.squarespace-cdn.com/content/v1/677410a41091921154662041/1742584389249-U3YY97VEC0SQ84UW97VG/aa_11.png Models - Ebola 1.0 https://images.squarespace-cdn.com/content/v1/677410a41091921154662041/f08b6ffe-fda8-46f4-94ab-2681bfd48589/5_nucleotide.png Models - Ebola 1.0 - Make it stand out AI generated sequence aligned to ‘MT778479’ (sequenced 2019-12-29). https://images.squarespace-cdn.com/content/v1/677410a41091921154662041/1742585399471-30PA0JBNO6Y1MIKLTW3C/p_0.png Models - Ebola 1.0 https://images.squarespace-cdn.com/content/v1/677410a41091921154662041/1742585399471-UXU4AZTVIA2M09MCADZH/p_1.png Models - Ebola 1.0 https://images.squarespace-cdn.com/content/v1/677410a41091921154662041/1742585400237-HZFQ8ZCSKONJGEE0PR03/p_2.png Models - Ebola 1.0 https://images.squarespace-cdn.com/content/v1/677410a41091921154662041/1742585400311-F0LM6O6S604GM9OHPO9Q/p_3.png Models - Ebola 1.0 https://images.squarespace-cdn.com/content/v1/677410a41091921154662041/1742585401055-5Y6HEDH3QTFVH85KAJB5/p_4.png Models - Ebola 1.0 https://images.squarespace-cdn.com/content/v1/677410a41091921154662041/1742585401140-TK42R80U5WVSFPDOGQWT/p_5.png Models - Ebola 1.0 https://images.squarespace-cdn.com/content/v1/677410a41091921154662041/1742585402699-C42XVPS9SRN6L0T1BH02/p_6.png Models - Ebola 1.0 https://images.squarespace-cdn.com/content/v1/677410a41091921154662041/1742585402854-2N085A2LR2A6X9ARFIA3/p_7.png Models - Ebola 1.0 https://images.squarespace-cdn.com/content/v1/677410a41091921154662041/1742585403507-WBM7JCWE4SBVHN6S8MK8/p_8.png Models - Ebola 1.0 https://images.squarespace-cdn.com/content/v1/677410a41091921154662041/1742585403584-1T231UI442NA9P1PA0KX/p_9.png Models - Ebola 1.0 https://images.squarespace-cdn.com/content/v1/677410a41091921154662041/1742585404256-MITDP4WKYZSY5493OMYK/p_10.png Models - Ebola 1.0 https://images.squarespace-cdn.com/content/v1/677410a41091921154662041/1742585404420-VUU7GSTDD3QKZC7HOSAN/p_11.png Models - Ebola 1.0 https://images.squarespace-cdn.com/content/v1/677410a41091921154662041/1742585404999-EJSCBCXUT9G4TA1QIBFN/p_12.png Models - Ebola 1.0 https://www.pathogen-ai.com/models/hpv monthly 0.5 2025-03-23 https://images.squarespace-cdn.com/content/v1/677410a41091921154662041/faa8c089-44a1-44f6-88dc-647c9e38ac60/nt_1.png Models - HPV 1.0 - Make it stand out AI generated sequence aligned to ‘LC786758’ (sequenced 2021-01-01). https://images.squarespace-cdn.com/content/v1/677410a41091921154662041/5156cb46-903f-4db0-a4d1-4bebe9ad6ec7/aa_1.png Models - HPV 1.0 - Make it stand out Resulting AI Predicted Amino Acid Sequence Aligned To ‘LC786760’ (sequenced 2022-01-01). https://images.squarespace-cdn.com/content/v1/677410a41091921154662041/1742657222069-NS9G2QL6JWDUECZYCRWM/c_1.png Models - HPV 1.0 https://images.squarespace-cdn.com/content/v1/677410a41091921154662041/1742657222068-BL1HROXICY5RSNKYAK0Y/c_0.png Models - HPV 1.0 https://images.squarespace-cdn.com/content/v1/677410a41091921154662041/73348dfd-ce15-4d6e-bf44-f0728bfa3427/inp.png Models - HPV 1.0 - Make it stand out AI Model Prediction Scoring Perfect Accuracy. Japan HPV Major Capsid Protein L1 Gene. Input sequence date: 2021-01-01. Output sequence date: 2022-01-01. 3 amino Acids mutations correctly predicted https://images.squarespace-cdn.com/content/v1/677410a41091921154662041/1742657167183-4RQD7PUYUKEUE3YEPHGF/cc_a1.png Models - HPV 1.0 https://images.squarespace-cdn.com/content/v1/677410a41091921154662041/1742657167182-ZW1UJUM3QPE0M938B0RM/caa_0.png Models - HPV 1.0 https://images.squarespace-cdn.com/content/v1/677410a41091921154662041/1742656603414-NT41UIPGOJ2ZIHQWF7JN/aa_1.png Models - HPV 1.0 https://images.squarespace-cdn.com/content/v1/677410a41091921154662041/1742656603403-VTVRNMCC6OA5HHNFIY85/aa_0.png Models - HPV 1.0 https://images.squarespace-cdn.com/content/v1/677410a41091921154662041/1742656647280-4ENCE704JP4SBTGE6KUU/nt_1.png Models - HPV 1.0 https://images.squarespace-cdn.com/content/v1/677410a41091921154662041/1742656647277-AOO8UGU0T3HZOG06XE68/nt_0.png Models - HPV 1.0 https://www.pathogen-ai.com/models/influenza-a-h3n2 monthly 0.5 2025-04-11 https://images.squarespace-cdn.com/content/v1/677410a41091921154662041/1743517019848-MLPGH59KUYDXZ50F9Y37/inf_a_3.png Models - Influenza A - H3N2 https://images.squarespace-cdn.com/content/v1/677410a41091921154662041/1743517019852-06TRSBFBWIQYWB7XOJ5L/inf_a_2.png Models - Influenza A - H3N2 https://www.pathogen-ai.com/models/embeddings monthly 0.5 2025-02-25 https://images.squarespace-cdn.com/content/v1/677410a41091921154662041/ff2f6399-d6be-4ae4-b05f-f81c80b6a3c4/Screenshot+2025-02-22+093240.png Models - GeneEmbed - Make it stand out t-SNE plot of embeddings from GeneEmbed (Promoter Tata Dataset) https://images.squarespace-cdn.com/content/v1/677410a41091921154662041/8d493c8d-fc22-4e57-b699-de0dd703ba40/Screenshot+2025-01-24+172655+%282%29.png Models - GeneEmbed - Make it stand out t-SNE plot of embeddings from GeneEmbed (Splice Sites Donors Dataset) https://www.pathogen-ai.com/models/category/Policy monthly 0.5 https://www.pathogen-ai.com/models/category/AI monthly 0.5 https://www.pathogen-ai.com/models/category/Ebola monthly 0.5 https://www.pathogen-ai.com/research daily 0.75 2025-03-24 https://www.pathogen-ai.com/research/ebola monthly 0.5 2025-03-23 https://www.pathogen-ai.com/research/hpv-type-16 monthly 0.5 2025-03-24 https://www.pathogen-ai.com/research/rotavirus-a monthly 0.5 2025-03-23 https://www.pathogen-ai.com/research/influenza-a-h1n1 monthly 0.5 2025-03-23 https://www.pathogen-ai.com/contact daily 0.75 2025-02-24 https://www.pathogen-ai.com/about daily 1.0 2025-03-26 https://images.squarespace-cdn.com/content/v1/677410a41091921154662041/8082a605-4283-49e0-afd7-6d707e38a55b/ChatGPT+Image+Mar+26%2C+2025%2C+12_05_12+PM.png